CDS

Accession Number TCMCG005C15172
gbkey CDS
Protein Id XP_020263709.1
Location join(142980704..142980863,142984279..142984349,142984449..142984568,142985195..142985271,142989214..142989277,142989521..142989591,142991712..142991789,142991874..142991919,142998843..142999023,142999113..142999165,142999282..142999355,142999481..142999598,143001169..143001253,143003034..143003146,143004045..143004172,143004580..143004659,143005172..143005413,143005502..143005660,143005816..143005977,143006080..143006154,143008799..143008902,143008969..143009044,143009318..143009437,143009522..143009665,143011536..143011748,143013572..143013826,143014119..143014532)
Gene LOC109839621
GeneID 109839621
Organism Asparagus officinalis

Protein

Length 1160aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020408120.1
Definition DNA-directed RNA polymerase I subunit 2 isoform X2

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00182        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03002        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005736        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006360        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCCGACCAAATCAAAGAAGCCGGACTACTCCTCGCTCCGACACCTCTTCAAGCCCCACATCGAGTCCTTCGACTACTTCATCGACAAAGGGATGGAGCTCGCTCTCACCTCCATTAGGCCTGTTGAGATCGCCGATGGCAATACCAAATTAAGAATATATTTTGGTGAGCCGCGGTTGTTGCCTCCAAGGGATGCTTCGGCCAATAGAAACATTTATCCGCAAGAGTGCAGAGAAGCAAGAACAACGTACAAAGGAGATTTCTCAGTCGAAGTATTTTTCCAGTACAATGATGGGCCCTCAATTAGGCATAGGCTCAGCTTTGGTCAATTGCCCATAATGTTGATGTCGAAACGCTGTCATTTAAGAGGTGCTGACCCCTCAAAACTTATTTATCATAAGGAAGAGGCCACTGAAATGGGTGGGTACTTCATTTGTAATGGGTTGGAAAGACTCTGTCGACTTCTGATTCTGCAAAAACGTAATTATCCAATGAGTCTGGTGCGCAAGGTATTTCGTGCACGGGGAGATGGATACAGTGATAAGGCAGTCGTGATGAGATGTGTTCGAGAAGATCAGTCTGGTGTGACAGTTAAATTGTATTATCTTCAAAATGGAAGCGCAAGACTTGGTTTCTGGATTGGAGGAAGAGAGTTCTTGCTTCCTGTCGGCATTGTCTTGAAGGCTCTCATTGACACTAATGACCATGAAATCTATGTGAGCTTAACATGCTGCTATAAAGAGAGATATCAGCGGGAAAAGGGTGCTGTTGGCACGCAGCTGATAGGTGAAAGGGCTCAAATAATTCTTGATGAAGTCAGAAACTTGTCTCTTTTTACGCGCTCTGATTGCTTAAAGCATATTGGGGAATACTTTAAACCGGCCATTGATGGATTTGAAGCTGAAAGTTACACAGCTGTTGCGGATGCTGTTCTGAGAGATTATATATTTGTGCATCTTACAAGCAACCATGACAAGTTCAATTTGCTAATTTTTATGCTACAGAAGCTTTATGCACTTGTAGATCAGACTGCTGCACCTGATAATGGGGACGTGCTGCAAAATCAGGAAGTTCTACTACCTGGACACTTAATTTCTATTTATCTTAAGGAAAAAGTTGTGGAATGGCTACGCAGATCAAGGCGCCTGCTTGCTGAAGAGATGGCCAAAAGCAAAGACTTCAGCATTAAAGATCCCGAGCAAGTAAAGAAATTTCTGGCTCGAAGTTCTGTTTCAATAGGCAGAAGTATTGAGAGCATGTTAAAGGTTGGAAGATTGGCTACTGCATCGAGTTTAGACTTACCTCAGAAAGAAGGAGTGACTATTCAAGCAGAGAGACTAAACTATCTTAGATTCATATCTCATTTTTGTGCTGTTCATCGAGGTGCTGCCTTTGCCAAAATGCGAACGACAGTTGTACGAAAACTGATGCCAGAGTCTTGGGGTTTCCTCTGTCCAGTTCATACACCTGATGGAGAGCCTTGTGGCCTGCTCAACCATATGACATCTACATGCTGTATTACCTCTTACTTCAACACTGAGGGTAAAGTAAAAGATTTTCGTGATATACAAAGATCAATTCAGAATGTGTTGATTCGTCTTGGAATGAGTCCTTTGCTGCCAAAGCTTGAACATGCCGGTCCTCCGGAGGTTCTTCAAGTTCTATTAGATGGGCGTCTTGTAGGTTCTATTGCGTGTACGGAAGTAGAGAAAGCTGTTGCACATATTCGTAGCTTGAAGCTTTCTGCATCTTCGAGGATTCCTGATGATCTGGAAGTGGGATATGTACCTCTAAGTCTTGGGGGAGCCTACCCTGGCTTGTACCTTTTCACTTCTCCTTCAAGATTTCTTCGGCCAGTTAGGAACATTTCCCATACCACAGATCAAAATATTGAGCTGATTGGTCCATTTGAACAGGCATTTATGGAAATACGATGTGCTGATGGTAGTGACGGTGGAAGAAGATCGTTTCCAGCAACACATGAAGAAATCCATCCAACTGGCATACTTAGTGTAGTTGCAAACCTCACGCCATGGTCTGATCACAACCAGAGTCCCCGTAACATGTATCAGTGTCAGATGGCAAAGCAAACTATGGGATTTTCTTCACAAGCTATACGATTTCGTACGGATGTGAAAGCATACCATCTACAGACACCTCAATCTCCAATCGTGCGGACAGCGTCGTACAATAAATATTGTGTAGATGAATTCCCCACTGGAACAAATGCAATTGTAGCAGTGCTAGCTTACTCAGGCTATGACATGGAAGATGCCATGATCTTGAATAAGTCATCCGTTGATCGTGGGCTGTGTCGTGGACATATATATCAGACAGAATCAATTGACTTGGCAGAGAGGCAGGAAAAATCAAGTAAAAAAGTCTTTGCAAGAAGCAATGATAAGAGCATGAGTTCTTCCATTGATTCTGACGGGCTTCCTTATATTGGACAGATGGTAAAACCAAAAGAACCACTGTATAGCACTTACGATGACTTGACTAGCGATGTAAAATCCACTCTTCTCAAGGGATCAGAACCCGTTATTGTTGATAATGTGACTGTTATAGGTACAGCTTCAAAGAACTGCATGCAAAAGGTTAATATACGTACTCGCCGCATTAGAAATCCTATCATTGGTGACAAATTCAGCAGCAGACATGGACAGAAGGGTGTTTGCTCTCAGCTATGGCCTGATATTGATATGCCATTTTCTGCAGTTACCGGAATGCGACCTGATCTCATAATTAATCCTCATGCATTTCCTTCCAGAATGACAATTGGAATGCTTTTAGAATCTATTGCTGCTAAGGCAGGAAGCCTTCATGGGAAGTTTATAGATGCAACACCTTTTGCGAGCTCAGTTGATAAAAAGGATGGAAAGGAACGCTCAGAACGAAGCTCTTTGGTTGATGAACTGGGCCCTATGCTAGCATCCCATGGGTTTAATTATCATGGATCAGAGGTCTTGTATAGTGGATTTTATGGTACAGAGATGACTTGTGAAATATTTATTGGGCCTGTATACTACCAACGGCTTAGACATATGGTGTCTGACAAATTTCAGGTTCGGTCCACTGGAACTGTGGACCCAATAACCCGGCAACCAGTCGGAGGAAGAAAGCGAGGGGGAGGTATTCGATTCGGTGAGATGGAACGAGACTCTGTTCTTGCTCATGGAGCTGCCTATCTCTTACACGACCGTCTCCACTCTTGCTCGGATTATCACATTGCCGAGGTTTGCTCTTTTTGTGGCAGTTTACTTACTGCGACAGTAATTCAACAGCAGAAGAGAATAGTGCAAGAGATTCCAGGGGTTCCCCAAACCAGAACTCCGAAGAATTTTACGTGCCATGCCTGCAAAACCAAGAAGGGGATGGAGACGGTGGCGATGCCTTACGTTTTTAGGTATTTGGCCGCTGAGCTTGCAGCCATGAATATCAGAATGGAGCTTAAGCTGAGTAATAGAGCTGGGTGCTAA
Protein:  
MAPTKSKKPDYSSLRHLFKPHIESFDYFIDKGMELALTSIRPVEIADGNTKLRIYFGEPRLLPPRDASANRNIYPQECREARTTYKGDFSVEVFFQYNDGPSIRHRLSFGQLPIMLMSKRCHLRGADPSKLIYHKEEATEMGGYFICNGLERLCRLLILQKRNYPMSLVRKVFRARGDGYSDKAVVMRCVREDQSGVTVKLYYLQNGSARLGFWIGGREFLLPVGIVLKALIDTNDHEIYVSLTCCYKERYQREKGAVGTQLIGERAQIILDEVRNLSLFTRSDCLKHIGEYFKPAIDGFEAESYTAVADAVLRDYIFVHLTSNHDKFNLLIFMLQKLYALVDQTAAPDNGDVLQNQEVLLPGHLISIYLKEKVVEWLRRSRRLLAEEMAKSKDFSIKDPEQVKKFLARSSVSIGRSIESMLKVGRLATASSLDLPQKEGVTIQAERLNYLRFISHFCAVHRGAAFAKMRTTVVRKLMPESWGFLCPVHTPDGEPCGLLNHMTSTCCITSYFNTEGKVKDFRDIQRSIQNVLIRLGMSPLLPKLEHAGPPEVLQVLLDGRLVGSIACTEVEKAVAHIRSLKLSASSRIPDDLEVGYVPLSLGGAYPGLYLFTSPSRFLRPVRNISHTTDQNIELIGPFEQAFMEIRCADGSDGGRRSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIRFRTDVKAYHLQTPQSPIVRTASYNKYCVDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCRGHIYQTESIDLAERQEKSSKKVFARSNDKSMSSSIDSDGLPYIGQMVKPKEPLYSTYDDLTSDVKSTLLKGSEPVIVDNVTVIGTASKNCMQKVNIRTRRIRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKAGSLHGKFIDATPFASSVDKKDGKERSERSSLVDELGPMLASHGFNYHGSEVLYSGFYGTEMTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPITRQPVGGRKRGGGIRFGEMERDSVLAHGAAYLLHDRLHSCSDYHIAEVCSFCGSLLTATVIQQQKRIVQEIPGVPQTRTPKNFTCHACKTKKGMETVAMPYVFRYLAAELAAMNIRMELKLSNRAGC